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Classification of sleep phases using polysomnographic data
Králík, Martin ; Kozumplík, Jiří (referee) ; Ronzhina, Marina (advisor)
Aim of this thesis is the classification of polysomnographic data. The first part of the thesis is a review of mentioned topic and also the statistical analysis of classification features calculated from real EEG, EOG and EMG for evaluating of the features suitability for sleep stages scoring. The second part is focused on the automatic classification of the data using artificial neural networks. All the results are presented and discussed.
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Advanced scoring of sleep data
Jagošová, Petra ; Novotná, Petra (referee) ; Ronzhina, Marina (advisor)
The master´s thesis is focused on advanced scoring of sleep data, which was performed using deep neural network. Heart rate data and the movement information were used for scoring measured using an Apple Watch smartwatch. After appropriate pre-processing, this data serves as input parameters to the designed networks. The goal of the LSTM network was to classify data into either two groups for sleep and wake or into three groups for wake, Non-REM and REM. The best results were achieved by network doing classification of sleep vs. wake using the accelerometer. The statistical evaluation of this best-designed network reached the values of sensitivity 71,06 %, specificity 57,05 %, accuracy 70,01 % and F1 score 81,42 %.
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Detection of sleep apnea from polysomnographic signals
Vecheta, Miroslav ; Potočňák, Tomáš (referee) ; Kozumplík, Jiří (advisor)
This thesis deals with the detection of sleep apnea using polysomnographic data and attempt to find a possible alternative and simpler method of this detection. The thesis consists of three parts: The first part is important for introduction to the lungs anatomy and the physiology of breathing and the sleep phisiology. The second part deals with the ways of testing sleep apnea. The third part then continues with implementation of alternative methods of testing in Matlab software. The final program calculates the breathing curve from ECG data. The curve is important for the final detection of sleep apnea.
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Obstructive sleep apnea detection using polysomnography
Smrčková, Markéta ; Mézl, Martin (referee) ; Králík, Martin (advisor)
This thesis attempts to find an alternative method for automatic detection of sleep apnea using polysomnographic data. The first part is focused on introduction to lungs anatomy and physiology of breathing, sleeping and cardiac system. The second part describes the process of sleep examination and particular components of polysomnographic data. The third part is focused on realization of specific method for sleep apnoea detection, application on real data and results evalutation.
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Polysomnographic data analysis
Jagošová, Petra ; Králík, Martin (referee) ; Ronzhina, Marina (advisor)
The bachelor´s thesis is focused on analysis of polysomnographic signals based on various parameters in time and frequency domain. The parameters are acquired from 30 seconds long segments of EEG, EOG and EMG signals recorded during different sleep stages. The parameters useful for automatic detection of sleep stages are selected according to both visual analysis of boxplots and statistical analysis via comparison tests. EOG parameters selected in the time domain were mobility, skewness and kurtosis. Among EEG parameters, aktivity, 75. percentile, kurtosis and mobility were selected. Among EMG parameters, 75. percentile and complexity were selected. Finally, the parameters selected in the frequency domain were relative power spectra in alpha, delta and beta bands.
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Sleep apnea detection
Hastík, Matěj ; Janoušek, Oto (referee) ; Ronzhina, Marina (advisor)
This master‘s thesis deals with a detailed description of sleep apnea and methods of detection of sleep apnea. The first part of the work is focused on the physiology of sleep, sleep apnea itself, its distribution, symptoms, risk factors and treatment. The next part of the work deals with polysomnographic examination and methods for analysis of polysomnographic data. The last part is devoted to the procedure design for detecting sleep apnea by using only one kind of signal and by using more kinds of signals, implementation of these proposals, their testing on real data, evaluating the detection performance and comparing the results with data available in the literature.
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Sleep EEG analysis
Vávrová, Eva ; Kozumplík, Jiří (referee) ; Ronzhina, Marina (advisor)
The bachelor´s thesis is focused on analysis of sleep electroencephalograms based on extraction of chosen parameters in time and frequency domain. The parameters are acquired from segments of EEG signals coincident with sleep stages. The parameters used for automatic detection of sleep stages are selected according to statistical analysis. The program with a graphical user interface for selection, display and analysis EEG was created using Matlab.
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Analysis of sleep EEG signal
Ježek, Martin ; Kozumplík, Jiří (referee) ; Rozman, Jiří (advisor)
Cílem této práce byl vývoj programu pro automatickou detekci arousalu v signálu spánkového EEG s použitím metod časově-frekvenční analýzy. Předmětem studie bylo 13 celonočních polysomnografických nahrávek (čtyři svody EEG, EMG, EKG a EOG), tj. celkově více než 100 hodin záznamu. Jednalo se o část dat z dřívějších výzkumných prací expertní lékařky v problematice spánku Dr. Emilie Sforzy, Ženeva, Švýcarsko, která rovněž poskytla základní hodnocení těchto dat. V záznamech bylo celkem označeno 1551 arousal událostí. Pro usnadnění výběru konkrétní metody časově-frekvenční analýzy byla následně vytvořena sada nástrojů pro vizualizaci jednotlivých signálů a jejich různých časově-frekvenčních vyjádření. S ohledem na závěry vizuální analýzy, charakter signálu EEG a efektivitu výpočetních metod byla pro analýzu vybrána waveletová transformace s mateřskou vlnkou Daubechies řádu 6. Jednotlivé svody EEG byly dekomponovány do šesti frekvenčních pásem. Z takto odvozených signálů a signálu EMG byly následně stanoveny ukazatele možné přítomnosti události arousalu. Tyto ukazatele byly dále váhovány lineárním klasifikátorem, jehož hodnoty vah byly optimalizovány pomocí genetického algoritmu. Na základě hodnoty lineárního klasifikátoru bylo rozhodnuto o přítomnosti události arousalu v daném svodě EEG – arousal byl detekován, jestliže hodnota klasifikátoru překročila danou mez na dobu více než 3 a méně než 30 vteřin. V celém záznamu pak byl arousal označen, byl-li detekován alespoň v jednom ze svodů EEG. Následně byly odvozeny míry senzitivity a selektivity detekce, jež byly rovněž základem pro stanovení fitness funkce genetického algoritmu. Pro učení genetického algoritmu byly vybrány první čtyři záznamy. Na základě takto optimalizovaných vah vznikl program pro automatickou detekci, který na celém souboru 13 záznamů dosáhl ve srovnání s expertním hodnocením míry senzitivity 76,09%, selektivity 53,26% a specificity 97,66%.
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Automatic sleep scoring using polysomnographic data
Vávrová, Eva ; Potočňák, Tomáš (referee) ; Ronzhina, Marina (advisor)
The thesis is focused on analysis of polysomnographic signals based on extraction of chosen parameters in time, frequency and time-frequency domain. The parameters are acquired from 30 seconds long segments of EEG, EMG and EOG signals recorded during different sleep stages. The parameters used for automatic classification of sleep stages are selected according to statistical analysis. The classification is realized by artificial neural networks, k-NN classifier and linear discriminant analysis. The program with a graphical user interface was created using Matlab.
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Automatic sleep scoring using polysomnographic data
Kříženecká, Tereza ; Potočňák, Tomáš (referee) ; Ronzhina, Marina (advisor)
The thesis is focused on automatic classification of polysomnographic signals based on various parameters in time and frequency domain. The parameters are acquired from 30 seconds long segments of EEG, EMG and EOG signals recorded during different sleep stages. The parameters used for automatic classification of sleep stages are selected according to statistical analysis. Classification is performed using the SVM method and evaluation of the success of the classification is done using sensitivity, specificity and percentage success. Classification method was implemented using Matlab.
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